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Title Cold tolerance for the future: the CBF genes and beyond
   
Acronym FROSTY
   
Duration 1 April 2007 - 1 April 2010
   
Project leader Heather I. McKhann, INRA Study of Polymorphisms in Plant Genomes EPGV, France
   

Other project participants

Evelyne Téoulé, INRA Genetic and Plant Breeding Station SGAP, France
Chantal Teulières, University of Toulouse, France
Dirk K. Hincha, Max Planck Institute for Plant Molecular Physiology, Germany
Julio Salinas, Spanish Research Council (CSIC), Spain
  
Funding National Institute for Agricultural Research (INRA), France 
  Research Centre Juelich – Project Management Juelich (FZJ-PTO) on behalf of the Federal Ministry of Education and Research (BMBF), Germany
  Ministry for Education and Science (MICINN), Spain
   
Total granted budget  € 827,519
   
Abstract  

Much of the work on freezing tolerance in the last several years has focused on the CBF pathway. Despite many studies on these genes, it still remains to be determined how their expression is regulated and what the precise contribution of each individual gene to freezing tolerance and cold acclimation is. The general objective of this proposal is twofold: 1) to better understand the regulation of CBF gene expression and the involvement of the CBF cold response pathway in freezing tolerance and 2) to examine other pathways involved in freezing tolerance. We will use Arabidopsis and a commercially important tree species, Eucalyptus. For the first objective, we propose to use three complementary approaches: i) the study of natural variation, ii) the use of reporter-genes as well as RNAi and over-expressing (OE) lines, and iii) the study of mutants affected in CBF regulation. In Arabidopsis, we will identify more efficient natural variants of CBF genes (coding sequences and promoters), as well as new regulators of CBF expression. In Eucalyptus, the project aims to characterize CBF gene expression, to identify the CBF regulon(s), and to obtain molecular markers for EguCBF genes. In a second part, we will use recombinant inbred lines (RILs) of Arabidopsis that are available at the SGAP for phenotyping with respect to freezing tolerance in order to begin to examine non-CBF pathways. The results we expect to obtain from this project will constitute an important step for better applying our knowledge of the CBF genes, and perhaps others, to improve the freezing tolerance of many crop plants.

 
Progress
Figure 1 Left: CBF expression in control WS plants (blue) and RNAi lines (yellow) before transfer to cold (T0) and after 2h at 4°C. Right: Test of viability for control and RNAi plants after 7 d of acclimation, followed by 48h at -5°C.
Figure 2 Eucalyptus transformants. Left: Clear background; Right: Visualization of GFP
 
Output from the project (publications, patents, data resources, etcetera)
Articles
Novillo F, Medina J, Salinas J., (2007) Arabidopsis CBF1 and CBF3 have a different function than CBF2 in cold acclimation and define different gene classes in the CBF regulon. Proc Natl Acad Sci USA 2007, 104(52):21002-21007.

McKhann, H.I., Gery, C., Bérard, A., Lévêque, S., Zuther , E., Hincha, D., De Mita, S., Brunel, D., Téoulé, E., (2008) Natural variation in CBF gene sequence, gene expression and freezing tolerance in the Versailles core collection of Arabidopsis thaliana. Submitted.

Navarro M., Marque G., Ayax C., Keller G., Borges J.P., Marque C. Teulières, C. Complementary regulation of four Eucalyptus CBF genes under various cold conditions. J Exp Bot. 2009;60(9):2713-24

Abstracts
Navarro M, Ayax C, Marque C and Teulières C (2009) Overexpression of Eucalyptus CBF genes in an homologous system suggests a different efficiency in the control of cold Tolerance. International Conference “Plant Abiotic Stress Tolerance” 8-11 February 2009 Vienna, Austria.

Ellen Zuther, Elisa Schulz, Takayuki Tohge, Ronan Sulpice, Alisdair Fernie, Karin Koehl, Dirk K. Hincha: Characterization of freezing tolerance and field performance during overwintering of natural accessions of Arabidopsis thaliana, GABI-Statusseminar, March 2009, Potsdam, Germany

Marque G., Navarro M., Lévêque S., Borges J.P., Teulières C and Marque C. Structural analysis of Eucalyptus gunnii family of CBF transcription factor genes involved in cold tolerance. IUFRO Tree Biotechnology 2009. Whistler, British Columbia, Canada. 28 June–2 July, 2009

Marque G., Azar S., Adlanmerini M., McKhann H.I., Potts B., Marque C. and Teulières C. Natural variation in freezing tolerance, CBF gene sequence and expression in two contrasted Tasmanian E. gunnii families. IUFRO Tree Biotechnology 2009.Whistler, British Columbia, Canada. 28 June–2 July, 2009

Gery, C. , Lévêque, S., Legoupi, J., Zuther, E., Hincha, D., Brunel, D., Téoulé, E., McKhann, H., Freezing tolerance in Arabidopsis thaliana : The CBF genes and beyond. Adaptation Potential in Plants, Gregor Mendel Institute of Molecular Plant Biology, Vienna, Austria, March 19-21, 2009

Zuther E., Gery C., Lévêque S., Koehl K., McKhann H., Hincha D.K.Natural Variation in Freezing Tolerance, CBF Gene Sequence and Expression in the Versailles Core Collection of Arabidopsis thaliana. International Conference Plant Abiotic Stress Tolerance, Vienna, Austria. 8-11 February, 2009

Zuther E, Gery C, Lévêque S, McKhann H, Hincha DK:Natural variation in freezing tolerance, CBF gene sequence and expression in the Versailles core collection of Arabidopsis thaliana In: 19th International Conference on Arabidopsis Research (ICAR). Montreal Canada.

Julio Salinas. Transcriptional conttrol of cold acclimation in Arabidopsis. XVII Meeting of the Spanish Society of Plant Physiology. Alcala de Henares, Spain, 18-17 Nov. 2007.